Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 AC245052.3-201ENST00000450182 901 ntBASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 PLK5-205ENST00000642079 1969 ntBASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV4A0A0B4J268 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.77□□□□□ -0.04
TRAV4A0A0B4J268 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV4A0A0B4J268 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV4A0A0B4J268 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV4A0A0B4J268 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TRAV4A0A0B4J268 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV4A0A0B4J268 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV4A0A0B4J268 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 KRT18P14-201ENST00000534205 1250 ntBASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 CCDC92B-201ENST00000575506 885 ntBASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 AC104187.1-201ENST00000607510 612 ntBASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV4A0A0B4J268 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 KRT18P20-201ENST00000548986 1279 ntBASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 AP001160.3-201ENST00000601484 763 ntBASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV4A0A0B4J268 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV4A0A0B4J268 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms