Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AC138894.4-201ENST00000616703 256 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AL354751.3-201ENST00000618526 1027 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 GPC5-204ENST00000618596 960 ntTSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC145285.8-201ENST00000619561 255 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AC105339.4-201ENST00000624471 737 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AC106733.1-201ENST00000624476 1038 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AC007326.3-201ENST00000636418 176 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 CSGALNACT1-203ENST00000454498 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 WEE2-AS1-209ENST00000488785 2262 ntTSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 HADHAP1-201ENST00000514498 2284 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 ADAM20P3-201ENST00000508710 2106 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 LINC01281-202ENST00000448597 1773 ntTSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 PRAMEF1-201ENST00000332296 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 VWA5A-201ENST00000361352 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 PARP6-201ENST00000260376 2142 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC015961.1-201ENST00000589715 2124 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 GLI1-208ENST00000546141 3475 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 CHODL-202ENST00000338326 1974 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 SLC3A1-208ENST00000410056 1426 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 ATL1-201ENST00000358385 2647 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 AL135905.1-201ENST00000416120 801 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC092803.1-201ENST00000439570 359 ntTSL 3 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC9.85□□□□□ -0.83
MTHFRP42898 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC9.85□□□□□ -0.83
MTHFRP42898 LINC01501-203ENST00000449990 791 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC130651.1-201ENST00000482912 598 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC9.85□□□□□ -0.83
MTHFRP42898 LINC02116-201ENST00000509455 493 ntTSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 PPBPP2-202ENST00000514391 346 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC011726.1-201ENST00000515686 669 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 ZNF123P-201ENST00000531501 1196 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 PGA4-202ENST00000537932 840 ntTSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC9.85□□□□□ -0.83
MTHFRP42898 HP-207ENST00000562526 685 ntTSL 3 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC109597.1-201ENST00000564016 786 ntTSL 4 BASIC9.85□□□□□ -0.83
MTHFRP42898 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 LARS-216ENST00000618084 720 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
MTHFRP42898 ZNF736-201ENST00000355095 2098 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 INPP5F-202ENST00000369080 2882 ntTSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 AC008534.1-201ENST00000513849 1940 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC9.85□□□□□ -0.83
MTHFRP42898 FCRL1-203ENST00000368176 2596 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 TCEANC2-203ENST00000391366 1783 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 CABYR-218ENST00000627314 1622 ntTSL 2 BASIC9.85□□□□□ -0.83
MTHFRP42898 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 TTLL6-205ENST00000433608 2548 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 OR3A4P-202ENST00000624752 1461 ntBASIC9.85□□□□□ -0.83
MTHFRP42898 FANCB-201ENST00000324138 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
MTHFRP42898 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC9.84□□□□□ -0.83
MTHFRP42898 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
MTHFRP42898 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 AC097534.2-203ENST00000609900 1921 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 RAF1P1-201ENST00000508566 1696 ntBASIC9.84□□□□□ -0.83
MTHFRP42898 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 BEST3-203ENST00000331471 1506 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
MTHFRP42898 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC9.84□□□□□ -0.83
MTHFRP42898 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
MTHFRP42898 ATG10-IT1-201ENST00000396880 487 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms