Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 AC092620.3-201ENST00000562796 2764 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 GNL3LP1-201ENST00000399458 1643 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 CCL11-201ENST00000305869 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 CSHL1-202ENST00000309894 669 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
SLC1A1P43005 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 SNORA42.2-201ENST00000384771 134 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 IGKV1D-42-201ENST00000390278 373 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SLC1A1P43005 HIST1H1PS1-201ENST00000404269 574 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 AC008267.2-201ENST00000411606 981 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC9.75□□□□□ -0.85
SLC1A1P43005 FAM180A-202ENST00000415751 1073 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 COL4A2-AS1-201ENST00000417970 540 ntTSL 3 BASIC9.75□□□□□ -0.85
SLC1A1P43005 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC9.75□□□□□ -0.85
SLC1A1P43005 MTND6P11-201ENST00000431890 483 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 OR2W6P-201ENST00000439689 939 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 SNHG14-204ENST00000441592 608 ntTSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC9.75□□□□□ -0.85
SLC1A1P43005 AC016820.1-201ENST00000455498 579 ntTSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 RN7SL120P-201ENST00000463924 296 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 RN7SL822P-201ENST00000475674 296 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 RN7SL169P-201ENST00000485643 289 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 RN7SL167P-201ENST00000498381 302 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC9.75□□□□□ -0.85
SLC1A1P43005 OR7E43P-201ENST00000503910 920 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 AC034154.1-202ENST00000518105 691 ntTSL 3 BASIC9.75□□□□□ -0.85
SLC1A1P43005 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 MYL6-206ENST00000547408 683 ntTSL 3 BASIC9.75□□□□□ -0.85
SLC1A1P43005 LINC02166-201ENST00000567544 721 ntTSL 3 BASIC9.75□□□□□ -0.85
SLC1A1P43005 MIR4695-201ENST00000577305 74 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 MIR4419A-201ENST00000583845 77 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 MIR7515HG-229ENST00000589150 962 ntTSL 5 BASIC9.75□□□□□ -0.85
SLC1A1P43005 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SLC1A1P43005 CXCL17-202ENST00000601181 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC9.75□□□□□ -0.85
SLC1A1P43005 ADAM6-202ENST00000616762 999 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 AC024257.4-201ENST00000618746 458 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 AC005703.5-201ENST00000623654 555 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 DTL-206ENST00000542077 4471 ntTSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 UNC5D-205ENST00000449677 2448 ntTSL 2 BASIC9.75□□□□□ -0.85
SLC1A1P43005 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC9.75□□□□□ -0.85
SLC1A1P43005 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 CLUHP4-201ENST00000507604 1343 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 AC104472.1-201ENST00000399242 1585 ntBASIC9.75□□□□□ -0.85
SLC1A1P43005 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
SLC1A1P43005 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SLC1A1P43005 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 ATG4A-202ENST00000345734 2129 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SLC1A1P43005 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC9.74□□□□□ -0.85
SLC1A1P43005 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 RBMS3-209ENST00000452462 1547 ntAPPRIS ALT1 TSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 ATOX1-201ENST00000313115 488 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 HSD17B3-202ENST00000375263 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
SLC1A1P43005 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 VAMP8-202ENST00000409760 805 ntTSL 3 BASIC9.74□□□□□ -0.85
SLC1A1P43005 AL606490.5-201ENST00000413071 760 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 AC021028.1-201ENST00000417559 598 ntTSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 SLC25A5P4-201ENST00000418448 869 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 RPL29P28-201ENST00000421928 472 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 AC244098.1-201ENST00000436499 275 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 PPP1R2P2-201ENST00000440405 613 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 AC245517.3-201ENST00000440562 250 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 CCR5-202ENST00000445772 1292 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SLC1A1P43005 RN7SL484P-201ENST00000462651 202 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 IGKV1-12-201ENST00000480492 398 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SLC1A1P43005 ENPP7P4-201ENST00000487446 1086 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 IGKV1-17-201ENST00000490686 378 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SLC1A1P43005 FXYD6P3-201ENST00000495569 285 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 AC113355.1-201ENST00000510512 491 ntTSL 3 BASIC9.74□□□□□ -0.85
SLC1A1P43005 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC9.74□□□□□ -0.85
SLC1A1P43005 RFPL4AP7-201ENST00000520120 215 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 AP003385.4-201ENST00000524977 324 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 AC087521.2-203ENST00000530450 593 ntTSL 4 BASIC9.74□□□□□ -0.85
SLC1A1P43005 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 AC002116.2-201ENST00000586962 643 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 ZNF222-203ENST00000587846 537 ntTSL 4 BASIC9.74□□□□□ -0.85
SLC1A1P43005 AC005050.1-201ENST00000591803 550 ntTSL 4 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms