Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ANKRD1-201ENST00000371697 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 PALB2-201ENST00000261584 4003 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 YPEL4-203ENST00000524669 4000 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 MIR2052HG-203ENST00000523118 2125 ntTSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 LINC02554-201ENST00000426467 5052 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC064805.1-202ENST00000569279 3493 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 ATP6AP1L-201ENST00000380167 2503 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC004801.7-201ENST00000624535 2973 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AK3-204ENST00000611749 4029 ntTSL 4 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 MIA3-202ENST00000344507 2026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 GABRA2-201ENST00000356504 2770 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 MIR205HG-204ENST00000431096 908 ntTSL 3 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AL133410.1-202ENST00000431981 472 ntTSL 3 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 PNPT1P1-201ENST00000450418 2315 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC107613.1-201ENST00000450488 1018 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 DEFT1P-201ENST00000453425 496 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 RN7SL263P-201ENST00000467969 290 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 RN7SL318P-201ENST00000471955 297 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC110768.2-201ENST00000506540 329 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC025524.2-201ENST00000520862 536 ntTSL 4 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC120042.1-201ENST00000524309 550 ntTSL 5 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AP000866.3-201ENST00000534607 433 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 PGA4-202ENST00000537932 840 ntTSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC006441.4-201ENST00000583161 636 ntTSL 3 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 PACERR-201ENST00000608917 825 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 PABPC1-224ENST00000610907 1569 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 BOC-201ENST00000273395 4276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 BOC-202ENST00000355385 4278 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 AC131935.2-201ENST00000623649 1371 ntBASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SYCE2Q6PIF2 GAPDHP72-203ENST00000638093 1602 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 DHRS9-208ENST00000602501 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 ATP12A-202ENST00000381946 4258 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 ABLIM1-203ENST00000369253 2255 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC138951.1-201ENST00000502532 2685 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 ARHGEF9-232ENST00000637417 5114 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 RGS6-207ENST00000434263 1828 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC073263.1-202ENST00000401851 924 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 LYPLA2P3-201ENST00000417429 576 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 GAPDHP68-201ENST00000434621 1008 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC092803.1-201ENST00000439570 359 ntTSL 3 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 OR5BH1P-201ENST00000454101 919 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 RN7SL359P-201ENST00000473502 288 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC130651.1-201ENST00000482912 598 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 Z99943.2-201ENST00000507585 266 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 MIR3945HG-202ENST00000511703 729 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 SNORA68.4-201ENST00000516649 129 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC113146.1-201ENST00000558255 696 ntTSL 3 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 LINC02124-201ENST00000570087 484 ntTSL 2 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AL157904.1-201ENST00000610171 383 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC106733.1-201ENST00000624476 1038 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 SMIM7-221ENST00000627144 2171 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 DACH2-206ENST00000508860 1775 ntTSL 2 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 ZNF443-201ENST00000301547 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 POTEKP-201ENST00000397487 2688 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 TCF4-245ENST00000570177 1872 ntTSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms