Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SLC1A1P43005 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC9.78□□□□□ -0.84
SLC1A1P43005 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 BICC1-201ENST00000263103 1763 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SLC1A1P43005 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SLC1A1P43005 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC9.78□□□□□ -0.84
SLC1A1P43005 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SLC1A1P43005 AC021491.4-201ENST00000620769 2573 ntBASIC9.77□□□□□ -0.84
SLC1A1P43005 AC009163.7-201ENST00000621929 2557 ntBASIC9.77□□□□□ -0.84
SLC1A1P43005 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC9.77□□□□□ -0.84
SLC1A1P43005 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC9.77□□□□□ -0.84
SLC1A1P43005 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC9.77□□□□□ -0.85
SLC1A1P43005 MIA3-202ENST00000344507 2026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 AC079174.2-201ENST00000611145 2028 ntBASIC9.77□□□□□ -0.85
SLC1A1P43005 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 SCGB1D1-201ENST00000306238 453 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 MIRLET7E-201ENST00000362102 79 ntBASIC9.77□□□□□ -0.85
SLC1A1P43005 RPS27-202ENST00000392558 625 ntTSL 2 BASIC9.77□□□□□ -0.85
SLC1A1P43005 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 FAM133B-202ENST00000427372 931 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 FGF14-AS1-201ENST00000444686 294 ntTSL 3 BASIC9.77□□□□□ -0.85
SLC1A1P43005 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 RPSAP34-201ENST00000476193 736 ntBASIC9.77□□□□□ -0.85
SLC1A1P43005 AC092958.1-202ENST00000485006 424 ntTSL 3 BASIC9.77□□□□□ -0.85
SLC1A1P43005 AC091114.1-201ENST00000522815 630 ntTSL 3 BASIC9.77□□□□□ -0.85
SLC1A1P43005 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC9.77□□□□□ -0.85
SLC1A1P43005 LINC01912-201ENST00000581844 496 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 AC104532.2-201ENST00000591109 589 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 AC060766.4-201ENST00000592117 537 ntBASIC9.77□□□□□ -0.85
SLC1A1P43005 AC008878.1-202ENST00000599312 382 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
SLC1A1P43005 RPS16-204ENST00000599539 555 ntTSL 2 BASIC9.77□□□□□ -0.85
SLC1A1P43005 AC253536.6-201ENST00000609736 663 ntBASIC9.77□□□□□ -0.85
SLC1A1P43005 AL391094.1-201ENST00000612442 966 ntBASIC9.77□□□□□ -0.85
SLC1A1P43005 AL591926.7-201ENST00000614301 211 ntBASIC9.77□□□□□ -0.85
SLC1A1P43005 AC006547.1-201ENST00000628442 550 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC9.77□□□□□ -0.85
SLC1A1P43005 SMIM8-201ENST00000229570 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 ITM2A-201ENST00000373298 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC9.77□□□□□ -0.85
SLC1A1P43005 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC9.77□□□□□ -0.85
SLC1A1P43005 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 TP63-210ENST00000440651 2031 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SLC1A1P43005 AC090241.3-201ENST00000621730 2599 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 ZNF587P1-201ENST00000415378 1386 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
SLC1A1P43005 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC9.76□□□□□ -0.85
SLC1A1P43005 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 Z99289.2-201ENST00000603682 1931 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC9.76□□□□□ -0.85
SLC1A1P43005 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC9.76□□□□□ -0.85
SLC1A1P43005 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC9.76□□□□□ -0.85
SLC1A1P43005 MAPK10-260ENST00000641047 2546 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 AL132780.5-201ENST00000623843 1625 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 CCDC58-201ENST00000291458 720 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC9.76□□□□□ -0.85
SLC1A1P43005 GZMB-204ENST00000415355 923 ntTSL 2 BASIC9.76□□□□□ -0.85
SLC1A1P43005 AL022318.1-201ENST00000450216 678 ntTSL 3 BASIC9.76□□□□□ -0.85
SLC1A1P43005 PRR13P1-201ENST00000456678 408 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 LINC00881-202ENST00000471719 791 ntTSL 2 BASIC9.76□□□□□ -0.85
SLC1A1P43005 DMKN-237ENST00000472252 593 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
SLC1A1P43005 TMED10P2-201ENST00000474255 612 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC9.76□□□□□ -0.85
SLC1A1P43005 WBP1LP2-201ENST00000515260 998 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
SLC1A1P43005 AC087311.1-201ENST00000553060 1233 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 LINC00520-202ENST00000554196 514 ntTSL 3 BASIC9.76□□□□□ -0.85
SLC1A1P43005 ZNF814-212ENST00000597807 771 ntTSL 2 BASIC9.76□□□□□ -0.85
SLC1A1P43005 CYP2A7P2-201ENST00000600605 641 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
SLC1A1P43005 AC078776.2-201ENST00000641021 285 ntBASIC9.76□□□□□ -0.85
SLC1A1P43005 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SLC1A1P43005 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SLC1A1P43005 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms