Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 MCF2-209ENST00000520602 3945 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
MTHFRP42898 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 AC011095.1-201ENST00000584677 2794 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 HMGCLL1-205ENST00000398661 2532 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 PIK3CD-AS1-201ENST00000377320 1823 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 AC008764.10-201ENST00000625135 1830 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 IKZF3-214ENST00000467757 1362 ntTSL 5 BASIC9.94□□□□□ -0.82
MTHFRP42898 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
MTHFRP42898 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC9.94□□□□□ -0.82
MTHFRP42898 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
MTHFRP42898 UGT1A13P-201ENST00000424780 762 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 AC010967.3-201ENST00000438648 213 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 ENPP7P4-201ENST00000487446 1086 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 PLA2G12AP1-201ENST00000497678 568 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC9.94□□□□□ -0.82
MTHFRP42898 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 AC100818.1-202ENST00000523748 578 ntTSL 4 BASIC9.94□□□□□ -0.82
MTHFRP42898 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC9.94□□□□□ -0.82
MTHFRP42898 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC9.94□□□□□ -0.82
MTHFRP42898 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC9.94□□□□□ -0.82
MTHFRP42898 CAPN3-219ENST00000569136 1029 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 AC113189.3-201ENST00000576615 330 ntTSL 3 BASIC9.94□□□□□ -0.82
MTHFRP42898 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC9.94□□□□□ -0.82
MTHFRP42898 AC007450.2-201ENST00000614160 290 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC9.94□□□□□ -0.82
MTHFRP42898 ACTG1P9-201ENST00000457622 2658 ntBASIC9.94□□□□□ -0.82
MTHFRP42898 SOX2-OT-213ENST00000492337 2508 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 RRP12-201ENST00000315563 4038 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 GALNT8-201ENST00000252318 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 AL807761.4-201ENST00000439901 2277 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 GNG2-201ENST00000335281 3729 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MTHFRP42898 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC9.94□□□□□ -0.82
MTHFRP42898 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 ADGRG1-201ENST00000388813 3925 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 ASB9-203ENST00000380488 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 IL22RA1-201ENST00000270800 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 KCNA2-211ENST00000639233 5256 ntTSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 DCX-210ENST00000637453 2275 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 AL138690.1-201ENST00000568811 2243 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
MTHFRP42898 C9orf43-201ENST00000288462 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 PLA2G6-204ENST00000417303 501 ntTSL 4 BASIC9.93□□□□□ -0.82
MTHFRP42898 AC078883.3-202ENST00000417539 754 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 FAM213AP1-201ENST00000418757 668 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 FGL1-205ENST00000427924 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 SNAI1P1-201ENST00000428587 777 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC9.93□□□□□ -0.82
MTHFRP42898 LINC01655-201ENST00000431729 423 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 RPSAP28-201ENST00000437188 874 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 SAP18P3-201ENST00000449663 396 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 AC009945.1-201ENST00000453188 298 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 OR5BH1P-201ENST00000454101 919 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 RN7SL420P-201ENST00000463843 298 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 AL645949.1-201ENST00000510094 324 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC9.93□□□□□ -0.82
MTHFRP42898 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC9.93□□□□□ -0.82
MTHFRP42898 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC9.93□□□□□ -0.82
MTHFRP42898 AC027682.4-202ENST00000565929 515 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC9.93□□□□□ -0.82
MTHFRP42898 AC067904.3-201ENST00000617126 261 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 AC133485.6-201ENST00000624045 688 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms