Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FERP1-201ENST00000436391 793 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AP002852.1-201ENST00000489699 385 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 AC139887.2-203ENST00000503185 618 ntTSL 2 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AC137810.1-201ENST00000510433 540 ntTSL 4 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AC009806.1-201ENST00000526112 519 ntTSL 3 BASIC9.87□□□□□ -0.83
SLC1A1P43005 OR10Y1P-201ENST00000528485 974 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 AC090099.2-201ENST00000529793 681 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 TIMM8B-204ENST00000541231 805 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 PHBP19-201ENST00000547512 754 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 AC099511.1-202ENST00000563923 491 ntTSL 3 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AC005954.2-201ENST00000586503 556 ntTSL 5 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AC023302.1-201ENST00000607458 492 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 OR52R1-201ENST00000624978 948 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SLC1A1P43005 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC9.87□□□□□ -0.83
SLC1A1P43005 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 AL662907.2-201ENST00000624339 3448 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AL591222.1-201ENST00000568063 3844 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 RSPH10B2-202ENST00000403107 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 RSPH10B-203ENST00000405415 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC9.86□□□□□ -0.83
SLC1A1P43005 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 AC091304.1-201ENST00000564897 3034 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 AC010997.6-201ENST00000623230 1645 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 OR52E4-201ENST00000316987 1027 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
SLC1A1P43005 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC9.86□□□□□ -0.83
SLC1A1P43005 TRAV29DV5-201ENST00000390458 469 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
SLC1A1P43005 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 KYNU-204ENST00000410015 776 ntTSL 2 BASIC9.86□□□□□ -0.83
SLC1A1P43005 POU6F2-AS2-201ENST00000420243 514 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 UGT1A13P-201ENST00000424780 762 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 GACAT3-201ENST00000426539 1096 ntTSL 3 BASIC9.86□□□□□ -0.83
SLC1A1P43005 AC079779.2-202ENST00000427831 392 ntTSL 3 BASIC9.86□□□□□ -0.83
SLC1A1P43005 PDCL3P6-201ENST00000429744 706 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 MIR646HG-206ENST00000431181 858 ntTSL 3 BASIC9.86□□□□□ -0.83
SLC1A1P43005 LINC01186-201ENST00000446884 626 ntTSL 2 BASIC9.86□□□□□ -0.83
SLC1A1P43005 AL031597.1-201ENST00000447383 432 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 AL592546.1-201ENST00000448834 692 ntTSL 3 BASIC9.86□□□□□ -0.83
SLC1A1P43005 CTSLP4-201ENST00000454614 1002 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 PFN1P9-201ENST00000475753 433 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 AC233724.11-201ENST00000508480 404 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 AC138646.1-201ENST00000519983 633 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 AC090502.1-203ENST00000551726 554 ntTSL 4 BASIC9.86□□□□□ -0.83
SLC1A1P43005 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC9.86□□□□□ -0.83
SLC1A1P43005 AC004004.1-201ENST00000603784 250 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 RN7SL462P-201ENST00000610302 261 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 RN7SL422P-201ENST00000612850 261 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 RN7SL343P-201ENST00000620904 261 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 RN7SL640P-201ENST00000622591 261 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 RHOXF1P3-201ENST00000635058 502 ntBASIC9.86□□□□□ -0.83
SLC1A1P43005 LINC00595-215ENST00000635422 651 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC9.86□□□□□ -0.83
SLC1A1P43005 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 AC104574.2-201ENST00000559783 1985 ntTSL 3 BASIC9.86□□□□□ -0.83
SLC1A1P43005 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 CCNJL-208ENST00000541762 2965 ntTSL 5 BASIC9.86□□□□□ -0.83
SLC1A1P43005 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SLC1A1P43005 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
SLC1A1P43005 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC9.86□□□□□ -0.83
SLC1A1P43005 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC9.86□□□□□ -0.83
SLC1A1P43005 SLC7A13-202ENST00000419776 1618 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
SLC1A1P43005 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.85□□□□□ -0.83
SLC1A1P43005 RSRC1-201ENST00000295930 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 RSRC1-215ENST00000611884 1738 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SLC1A1P43005 LINC00426-207ENST00000447147 1589 ntTSL 3 BASIC9.85□□□□□ -0.83
SLC1A1P43005 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC9.85□□□□□ -0.83
SLC1A1P43005 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
SLC1A1P43005 AL023280.1-201ENST00000414840 1423 ntBASIC9.85□□□□□ -0.83
SLC1A1P43005 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SLC1A1P43005 EIF4BP6-201ENST00000431936 1828 ntBASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms