Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SNORA48.6-201ENST00000391156 130 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 EIF4A1P8-201ENST00000394444 1190 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 RN7SKP252-201ENST00000411210 327 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 MPDU1-204ENST00000423172 888 ntTSL 2 BASIC10.01□□□□□ -0.81
MTHFRP42898 RPSAP33-201ENST00000432315 865 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC10.01□□□□□ -0.81
MTHFRP42898 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC012593.1-201ENST00000453451 580 ntTSL 4 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC003666.1-201ENST00000454113 611 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 AL445220.1-201ENST00000456309 559 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 RPS20P23-201ENST00000461683 354 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AL451124.1-201ENST00000478520 1026 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AC017013.1-201ENST00000506459 799 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC008453.1-201ENST00000511626 425 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC116345.1-202ENST00000513379 941 ntTSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 MTND6P25-201ENST00000528711 516 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 IMMP1L-209ENST00000532287 685 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC137056.1-201ENST00000574654 341 ntTSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 RN7SL353P-201ENST00000579902 252 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 RN7SL557P-201ENST00000581047 286 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 NDE1P2-201ENST00000605569 1105 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 AC020907.4-201ENST00000605640 526 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 SLC25A15P4-201ENST00000614260 289 ntBASIC10.01□□□□□ -0.81
MTHFRP42898 SOX2-OT-244ENST00000627738 692 ntTSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 AL022100.1-201ENST00000636624 1678 ntTSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC084879.1-202ENST00000636927 2284 ntTSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC10.01□□□□□ -0.81
MTHFRP42898 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
MTHFRP42898 AC109779.1-203ENST00000411727 2100 ntTSL 2 BASIC10.01□□□□□ -0.81
MTHFRP42898 PNLIPRP1-214ENST00000528052 1533 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
MTHFRP42898 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 SAMD12-201ENST00000314727 2172 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MTHFRP42898 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC10.01□□□□□ -0.81
MTHFRP42898 BLOC1S2-203ENST00000441611 2024 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 UBE2V2-204ENST00000520809 2450 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 PPP2R2B-205ENST00000394414 2262 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 LINC01808-203ENST00000641932 1643 ntBASIC10□□□□□ -0.81
MTHFRP42898 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
MTHFRP42898 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 OVCH2-201ENST00000533663 1921 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
MTHFRP42898 PNLIPRP1-201ENST00000358834 1497 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 FLII-215ENST00000545457 3975 ntTSL 2 BASIC10□□□□□ -0.81
MTHFRP42898 AL359852.1-201ENST00000624609 2197 ntBASIC10□□□□□ -0.81
MTHFRP42898 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 BCL6B-201ENST00000293805 3555 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC10□□□□□ -0.81
MTHFRP42898 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
MTHFRP42898 TAC1-201ENST00000319273 1239 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 RNU1-7P-201ENST00000364105 164 ntBASIC10□□□□□ -0.81
MTHFRP42898 COX17P1-201ENST00000378775 192 ntBASIC10□□□□□ -0.81
MTHFRP42898 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC10□□□□□ -0.81
MTHFRP42898 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC10□□□□□ -0.81
MTHFRP42898 LINC02087-201ENST00000418821 951 ntTSL 2 BASIC10□□□□□ -0.81
MTHFRP42898 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC10□□□□□ -0.81
MTHFRP42898 AC016738.2-203ENST00000433012 489 ntTSL 3 BASIC10□□□□□ -0.81
MTHFRP42898 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC10□□□□□ -0.81
MTHFRP42898 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC10□□□□□ -0.81
MTHFRP42898 IFITM4P-207ENST00000441380 420 ntBASIC10□□□□□ -0.81
MTHFRP42898 SNX25P1-201ENST00000441817 834 ntBASIC10□□□□□ -0.81
MTHFRP42898 TSEN15P2-201ENST00000442453 358 ntBASIC10□□□□□ -0.81
MTHFRP42898 TUBB4BP2-201ENST00000454125 798 ntBASIC10□□□□□ -0.81
MTHFRP42898 COX5BP6-201ENST00000454311 211 ntBASIC10□□□□□ -0.81
MTHFRP42898 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC10□□□□□ -0.81
MTHFRP42898 AC006927.1-201ENST00000544818 498 ntBASIC10□□□□□ -0.81
MTHFRP42898 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
MTHFRP42898 AC009127.2-201ENST00000561979 426 ntTSL 5 BASIC10□□□□□ -0.81
MTHFRP42898 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC10□□□□□ -0.81
MTHFRP42898 AC063950.1-202ENST00000600133 568 ntBASIC10□□□□□ -0.81
MTHFRP42898 AC012594.1-253ENST00000609532 846 ntTSL 5 BASIC10□□□□□ -0.81
MTHFRP42898 KRTAP10-12-202ENST00000618832 282 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
MTHFRP42898 AC012594.1-214ENST00000630496 858 ntTSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms