Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 AC008694.1-202ENST00000636953 945 ntBASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 CYP21A1P-202ENST00000354927 1481 ntBASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN16Q9Y5I7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 AC142086.2-201ENST00000569753 217 ntBASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN16Q9Y5I7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 MKRN4P-201ENST00000444706 1521 ntBASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 AC027702.1-201ENST00000563810 1770 ntBASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN16Q9Y5I7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 AL355472.2-201ENST00000422958 438 ntBASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 AL138781.1-201ENST00000566567 1274 ntBASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN16Q9Y5I7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 MIPEPP3-201ENST00000412105 444 ntBASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 CYP2T3P-201ENST00000601990 817 ntBASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN16Q9Y5I7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 KRT17P1-201ENST00000399211 1546 ntBASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 MCRIP2P1-201ENST00000394346 511 ntBASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms