Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGA11Q9Y5H2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 KRT19P1-201ENST00000405746 1186 ntBASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA11Q9Y5H2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 AC011484.1-201ENST00000377652 1995 ntBASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA11Q9Y5H2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 AC097381.1-201ENST00000429019 1296 ntBASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 SLC7A5P2-201ENST00000553010 536 ntBASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 RARRES2P11-201ENST00000635158 484 ntBASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA11Q9Y5H2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 AC034268.1-201ENST00000441047 882 ntBASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 SLC7A5P1-201ENST00000568957 537 ntBASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA11Q9Y5H2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA11Q9Y5H2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms