Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 AL024507.2-201ENST00000606070 2574 ntBASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB11Q9Y5F2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB11Q9Y5F2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 AC007322.4-201ENST00000509611 723 ntBASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB11Q9Y5F2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 KRT18P29-201ENST00000397031 1267 ntBASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 MKRN4P-201ENST00000444706 1521 ntBASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB11Q9Y5F2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 AF106564.1-201ENST00000607058 2553 ntBASIC20.15■□□□□ 0.82
PCDHB11Q9Y5F2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 AC245052.3-201ENST00000450182 901 ntBASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 RNA5SP413-201ENST00000516373 109 ntBASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 AC069236.1-201ENST00000604339 616 ntBASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
PCDHB11Q9Y5F2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms