Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TNNQ9UQP3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNNQ9UQP3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.29■■□□□ 1.8
TNNQ9UQP3 FP700111.2-201ENST00000619190 1892 ntBASIC26.29■■□□□ 1.8
TNNQ9UQP3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
TNNQ9UQP3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TNNQ9UQP3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TNNQ9UQP3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNNQ9UQP3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.28■■□□□ 1.8
TNNQ9UQP3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
TNNQ9UQP3 AC007225.1-201ENST00000566331 1836 ntBASIC26.28■■□□□ 1.8
TNNQ9UQP3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNNQ9UQP3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNNQ9UQP3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TNNQ9UQP3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.28■■□□□ 1.8
TNNQ9UQP3 AC010536.3-201ENST00000620306 533 ntBASIC26.28■■□□□ 1.8
TNNQ9UQP3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.28■■□□□ 1.8
TNNQ9UQP3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNNQ9UQP3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
TNNQ9UQP3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNNQ9UQP3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNNQ9UQP3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNNQ9UQP3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNNQ9UQP3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.27■■□□□ 1.8
TNNQ9UQP3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TNNQ9UQP3 CNN2P6-201ENST00000439038 900 ntBASIC26.27■■□□□ 1.8
TNNQ9UQP3 DUX4L16-201ENST00000555130 1264 ntBASIC26.27■■□□□ 1.8
TNNQ9UQP3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.27■■□□□ 1.8
TNNQ9UQP3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNNQ9UQP3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNNQ9UQP3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC26.27■■□□□ 1.8
TNNQ9UQP3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNNQ9UQP3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNNQ9UQP3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNNQ9UQP3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNNQ9UQP3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNNQ9UQP3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 AC243732.1-201ENST00000612648 864 ntBASIC26.26■■□□□ 1.79
TNNQ9UQP3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNNQ9UQP3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNNQ9UQP3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNNQ9UQP3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
TNNQ9UQP3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TNNQ9UQP3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNNQ9UQP3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.25■■□□□ 1.79
TNNQ9UQP3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.25■■□□□ 1.79
TNNQ9UQP3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNNQ9UQP3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNNQ9UQP3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNNQ9UQP3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNNQ9UQP3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.25■■□□□ 1.79
TNNQ9UQP3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.25■■□□□ 1.79
TNNQ9UQP3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
TNNQ9UQP3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNNQ9UQP3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 AC004911.1-201ENST00000416316 871 ntBASIC26.24■■□□□ 1.79
TNNQ9UQP3 TERF1P5-201ENST00000477545 1207 ntBASIC26.24■■□□□ 1.79
TNNQ9UQP3 AC016405.3-201ENST00000607710 860 ntBASIC26.24■■□□□ 1.79
TNNQ9UQP3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TNNQ9UQP3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TNNQ9UQP3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TNNQ9UQP3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNNQ9UQP3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
TNNQ9UQP3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNNQ9UQP3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TNNQ9UQP3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNNQ9UQP3 AP005212.1-201ENST00000581547 1997 ntBASIC26.23■■□□□ 1.79
TNNQ9UQP3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TNNQ9UQP3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNNQ9UQP3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.23■■□□□ 1.79
TNNQ9UQP3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.22■■□□□ 1.79
TNNQ9UQP3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.22■■□□□ 1.79
TNNQ9UQP3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
TNNQ9UQP3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC26.22■■□□□ 1.79
TNNQ9UQP3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.22■■□□□ 1.79
TNNQ9UQP3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TNNQ9UQP3 AL391422.3-201ENST00000603791 2761 ntBASIC26.22■■□□□ 1.79
TNNQ9UQP3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms