Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 AC092068.2-201ENST00000590491 1708 ntBASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.17■■□□□ 1.62
ZC3H4Q9UPT8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 AC113347.1-201ENST00000413321 391 ntBASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
ZC3H4Q9UPT8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 AL355355.2-201ENST00000442321 338 ntBASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ZC3H4Q9UPT8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZC3H4Q9UPT8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.14■■□□□ 1.62
ZC3H4Q9UPT8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.14■■□□□ 1.62
ZC3H4Q9UPT8 AC005829.2-201ENST00000571422 1056 ntBASIC25.14■■□□□ 1.62
ZC3H4Q9UPT8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZC3H4Q9UPT8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ZC3H4Q9UPT8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
ZC3H4Q9UPT8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZC3H4Q9UPT8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
ZC3H4Q9UPT8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZC3H4Q9UPT8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZC3H4Q9UPT8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZC3H4Q9UPT8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ZC3H4Q9UPT8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 AC005521.1-201ENST00000393351 872 ntBASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ZC3H4Q9UPT8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 AC068473.5-201ENST00000616428 2072 ntBASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.12■■□□□ 1.61
ZC3H4Q9UPT8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 AL353807.1-201ENST00000427475 662 ntBASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZC3H4Q9UPT8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZC3H4Q9UPT8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms