Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 ABHD17AP5-201ENST00000580133 923 ntBASIC18.37■□□□□ 0.53
SSR3Q9UNL2 MTDHP2-201ENST00000601468 714 ntBASIC18.37■□□□□ 0.53
SSR3Q9UNL2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SSR3Q9UNL2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 AC098818.2-201ENST00000564925 2320 ntBASIC18.36■□□□□ 0.53
SSR3Q9UNL2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 AL031848.2-201ENST00000607670 837 ntBASIC18.36■□□□□ 0.53
SSR3Q9UNL2 AC092028.1-203ENST00000608262 953 ntBASIC18.36■□□□□ 0.53
SSR3Q9UNL2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSR3Q9UNL2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSR3Q9UNL2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 AP006587.3-201ENST00000525742 1516 ntBASIC18.34■□□□□ 0.53
SSR3Q9UNL2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 KRT8P33-201ENST00000508125 1423 ntBASIC18.34■□□□□ 0.53
SSR3Q9UNL2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 AL117332.1-201ENST00000622628 974 ntBASIC18.34■□□□□ 0.53
SSR3Q9UNL2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR3Q9UNL2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR3Q9UNL2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR3Q9UNL2 OR2I1P-207ENST00000453522 948 ntBASIC18.33■□□□□ 0.52
SSR3Q9UNL2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR3Q9UNL2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSR3Q9UNL2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms