Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.52■□□□□ 0.56
ZNF346Q9UL40 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF346Q9UL40 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF346Q9UL40 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF346Q9UL40 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF346Q9UL40 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF346Q9UL40 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF346Q9UL40 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF346Q9UL40 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ZNF346Q9UL40 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF346Q9UL40 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.52■□□□□ 0.55
ZNF346Q9UL40 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF346Q9UL40 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 KRT16P2-201ENST00000414673 1423 ntBASIC18.51■□□□□ 0.55
ZNF346Q9UL40 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 AC034268.1-201ENST00000441047 882 ntBASIC18.51■□□□□ 0.55
ZNF346Q9UL40 KRT18P14-201ENST00000534205 1250 ntBASIC18.51■□□□□ 0.55
ZNF346Q9UL40 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 SLC7A5P2-201ENST00000553010 536 ntBASIC18.51■□□□□ 0.55
ZNF346Q9UL40 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 AP001160.3-201ENST00000601484 763 ntBASIC18.51■□□□□ 0.55
ZNF346Q9UL40 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF346Q9UL40 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 AC087623.3-201ENST00000607047 1098 ntBASIC18.5■□□□□ 0.55
ZNF346Q9UL40 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF346Q9UL40 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 FP700111.2-201ENST00000619190 1892 ntBASIC18.49■□□□□ 0.55
ZNF346Q9UL40 AP005212.1-201ENST00000581547 1997 ntBASIC18.49■□□□□ 0.55
ZNF346Q9UL40 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF346Q9UL40 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF346Q9UL40 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF346Q9UL40 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF346Q9UL40 GABARAPL3-202ENST00000624044 1851 ntBASIC18.48■□□□□ 0.55
ZNF346Q9UL40 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF346Q9UL40 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF346Q9UL40 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF346Q9UL40 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms