Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MBD1Q9UIS9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MBD1Q9UIS9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MBD1Q9UIS9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MBD1Q9UIS9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MBD1Q9UIS9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 CYP2T3P-201ENST00000601990 817 ntBASIC20.87■□□□□ 0.93
MBD1Q9UIS9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MBD1Q9UIS9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MBD1Q9UIS9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.85■□□□□ 0.93
MBD1Q9UIS9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 AC008550.1-201ENST00000511500 884 ntBASIC20.84■□□□□ 0.93
MBD1Q9UIS9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 AC060766.5-201ENST00000590539 871 ntBASIC20.84■□□□□ 0.93
MBD1Q9UIS9 AC100791.3-201ENST00000617619 330 ntBASIC20.84■□□□□ 0.93
MBD1Q9UIS9 AL359736.2-201ENST00000621992 437 ntBASIC20.84■□□□□ 0.93
MBD1Q9UIS9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.84■□□□□ 0.93
MBD1Q9UIS9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MBD1Q9UIS9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
MBD1Q9UIS9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MBD1Q9UIS9 AC244015.2-201ENST00000616358 1861 ntBASIC20.83■□□□□ 0.92
MBD1Q9UIS9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.83■□□□□ 0.92
MBD1Q9UIS9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 HLA-B-256ENST00000639848 1089 ntBASIC20.82■□□□□ 0.92
MBD1Q9UIS9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MBD1Q9UIS9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.81■□□□□ 0.92
MBD1Q9UIS9 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.81■□□□□ 0.92
MBD1Q9UIS9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD1Q9UIS9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MBD1Q9UIS9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms