Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 AL355472.2-201ENST00000422958 438 ntBASIC19.69■□□□□ 0.74
CCDC88CQ9P219 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC88CQ9P219 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 DUSP5P2-201ENST00000426873 1033 ntBASIC19.68■□□□□ 0.74
CCDC88CQ9P219 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CCDC88CQ9P219 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC88CQ9P219 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 BX276092.2-201ENST00000417668 665 ntBASIC19.66■□□□□ 0.74
CCDC88CQ9P219 AC007322.3-201ENST00000426526 701 ntBASIC19.66■□□□□ 0.74
CCDC88CQ9P219 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC88CQ9P219 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC88CQ9P219 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC88CQ9P219 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC88CQ9P219 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.64■□□□□ 0.74
CCDC88CQ9P219 AL162412.1-201ENST00000567129 965 ntBASIC19.64■□□□□ 0.74
CCDC88CQ9P219 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.64■□□□□ 0.74
CCDC88CQ9P219 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.64■□□□□ 0.74
CCDC88CQ9P219 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC88CQ9P219 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 AL512625.2-201ENST00000417533 625 ntBASIC19.64■□□□□ 0.73
CCDC88CQ9P219 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC88CQ9P219 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms