Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.89■□□□□ 0.77
SPHK1Q9NYA1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 AL355472.2-201ENST00000422958 438 ntBASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPHK1Q9NYA1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 AC011484.1-201ENST00000377652 1995 ntBASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 MIPEPP3-201ENST00000412105 444 ntBASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 AC142086.2-201ENST00000569753 217 ntBASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SPHK1Q9NYA1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 BX276092.2-201ENST00000417668 665 ntBASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 AC098934.4-201ENST00000564127 592 ntBASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPHK1Q9NYA1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 AL137060.1-201ENST00000618151 2648 ntBASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 AC121338.2-201ENST00000622535 1744 ntBASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.85■□□□□ 0.77
SPHK1Q9NYA1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPHK1Q9NYA1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms