Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RLIMQ9NVW2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 AC121338.2-201ENST00000622535 1744 ntBASIC19.18■□□□□ 0.66
RLIMQ9NVW2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 LINC02228-203ENST00000641970 1355 ntBASIC19.18■□□□□ 0.66
RLIMQ9NVW2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RLIMQ9NVW2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 ZNRF2P3-201ENST00000424200 374 ntBASIC19.17■□□□□ 0.66
RLIMQ9NVW2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 AC007952.6-201ENST00000573168 2673 ntBASIC19.17■□□□□ 0.66
RLIMQ9NVW2 AC003957.1-201ENST00000625108 2673 ntBASIC19.17■□□□□ 0.66
RLIMQ9NVW2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RLIMQ9NVW2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 AP004607.4-201ENST00000530158 1459 ntBASIC19.16■□□□□ 0.66
RLIMQ9NVW2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RLIMQ9NVW2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RLIMQ9NVW2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RLIMQ9NVW2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.14■□□□□ 0.66
RLIMQ9NVW2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.14■□□□□ 0.65
RLIMQ9NVW2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RLIMQ9NVW2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RLIMQ9NVW2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RLIMQ9NVW2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.13■□□□□ 0.65
RLIMQ9NVW2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RLIMQ9NVW2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RLIMQ9NVW2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.13■□□□□ 0.65
RLIMQ9NVW2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms