Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.83■■□□□ 1.41
FBXO28Q9NVF7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
FBXO28Q9NVF7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
FBXO28Q9NVF7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
FBXO28Q9NVF7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
FBXO28Q9NVF7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FBXO28Q9NVF7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.81■■□□□ 1.4
FBXO28Q9NVF7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 EP400NL-214ENST00000641289 2402 ntBASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 UNC93B4-201ENST00000505679 747 ntBASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.8■■□□□ 1.4
FBXO28Q9NVF7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 AC233263.1-201ENST00000578059 224 ntBASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FBXO28Q9NVF7 AL117328.2-201ENST00000624617 1940 ntBASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.78■■□□□ 1.4
FBXO28Q9NVF7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms