Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 KRT19P1-201ENST00000405746 1186 ntBASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
POPDC3Q9HBV1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
POPDC3Q9HBV1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.27■□□□□ 0.83
POPDC3Q9HBV1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
POPDC3Q9HBV1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
POPDC3Q9HBV1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
POPDC3Q9HBV1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 AL162377.1-201ENST00000618844 1793 ntBASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 AC091799.1-201ENST00000422823 811 ntBASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 MIR2861-201ENST00000636310 90 ntBASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 AC019069.1-201ENST00000610008 1333 ntBASIC20.26■□□□□ 0.83
POPDC3Q9HBV1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.25■□□□□ 0.83
POPDC3Q9HBV1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POPDC3Q9HBV1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms