Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 AC034268.1-201ENST00000441047 882 ntBASIC19.72■□□□□ 0.75
BRF2Q9HAW0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 KRT18P61-201ENST00000585825 1298 ntBASIC19.72■□□□□ 0.75
BRF2Q9HAW0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRF2Q9HAW0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 MIR6821-201ENST00000617625 74 ntBASIC19.71■□□□□ 0.75
BRF2Q9HAW0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
BRF2Q9HAW0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.74
BRF2Q9HAW0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 AC091799.1-201ENST00000422823 811 ntBASIC19.7■□□□□ 0.74
BRF2Q9HAW0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 AC020907.5-201ENST00000624372 1936 ntBASIC19.7■□□□□ 0.74
BRF2Q9HAW0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.7■□□□□ 0.74
BRF2Q9HAW0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRF2Q9HAW0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 NTF6G-201ENST00000591094 616 ntBASIC19.68■□□□□ 0.74
BRF2Q9HAW0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRF2Q9HAW0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms