Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.04■■□□□ 1.44
EFCC1Q9HA90 AC107956.1-201ENST00000494359 873 ntBASIC24.04■■□□□ 1.44
EFCC1Q9HA90 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 SOX15-203ENST00000570788 1093 ntBASIC24.04■■□□□ 1.44
EFCC1Q9HA90 AC100791.3-201ENST00000617619 330 ntBASIC24.04■■□□□ 1.44
EFCC1Q9HA90 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
EFCC1Q9HA90 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 AL589743.5-201ENST00000616611 1050 ntBASIC24.03■■□□□ 1.44
EFCC1Q9HA90 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.03■■□□□ 1.44
EFCC1Q9HA90 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 REXO2-216ENST00000544196 452 ntTSL 3 BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
EFCC1Q9HA90 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 RCN1P1-201ENST00000400413 996 ntBASIC24.01■■□□□ 1.43
EFCC1Q9HA90 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 AC087499.1-201ENST00000418141 1075 ntBASIC24.01■■□□□ 1.43
EFCC1Q9HA90 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 FAM21FP-204ENST00000608637 956 ntBASIC24.01■■□□□ 1.43
EFCC1Q9HA90 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.01■■□□□ 1.43
EFCC1Q9HA90 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
EFCC1Q9HA90 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24■■□□□ 1.43
EFCC1Q9HA90 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24■■□□□ 1.43
EFCC1Q9HA90 AL445228.2-201ENST00000605589 952 ntBASIC24■■□□□ 1.43
EFCC1Q9HA90 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
EFCC1Q9HA90 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24■■□□□ 1.43
EFCC1Q9HA90 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24■■□□□ 1.43
EFCC1Q9HA90 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
EFCC1Q9HA90 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
EFCC1Q9HA90 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
EFCC1Q9HA90 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
EFCC1Q9HA90 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms