Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VIPAS39Q9H9C1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VIPAS39Q9H9C1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.13■□□□□ 0.97
VIPAS39Q9H9C1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 AC093503.3-201ENST00000624917 2352 ntBASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 NEFHP1-201ENST00000412845 2629 ntBASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 AC011484.1-201ENST00000377652 1995 ntBASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.12■□□□□ 0.97
VIPAS39Q9H9C1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AC241377.3-202ENST00000626088 1088 ntBASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AC241585.3-202ENST00000628937 1088 ntBASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AC245100.8-202ENST00000629247 1058 ntBASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
VIPAS39Q9H9C1 AC021242.3-201ENST00000607598 1377 ntBASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
VIPAS39Q9H9C1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 OR2I1P-207ENST00000453522 948 ntBASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VIPAS39Q9H9C1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms