Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRABDQ9H4I3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRABDQ9H4I3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 AC073314.1-201ENST00000568729 2216 ntBASIC21.16■□□□□ 0.98
TRABDQ9H4I3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 AC138907.5-202ENST00000569484 235 ntBASIC21.16■□□□□ 0.98
TRABDQ9H4I3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TRABDQ9H4I3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRABDQ9H4I3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRABDQ9H4I3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRABDQ9H4I3 AP004607.4-201ENST00000530158 1459 ntBASIC21.14■□□□□ 0.98
TRABDQ9H4I3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRABDQ9H4I3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
TRABDQ9H4I3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 MIR5787-201ENST00000611784 55 ntBASIC21.13■□□□□ 0.97
TRABDQ9H4I3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRABDQ9H4I3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 PLK5-205ENST00000642079 1969 ntBASIC21.12■□□□□ 0.97
TRABDQ9H4I3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 KRT19P1-201ENST00000405746 1186 ntBASIC21.12■□□□□ 0.97
TRABDQ9H4I3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 AC008175.2-201ENST00000612840 297 ntBASIC21.12■□□□□ 0.97
TRABDQ9H4I3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 AC004854.2-201ENST00000608450 1441 ntBASIC21.12■□□□□ 0.97
TRABDQ9H4I3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRABDQ9H4I3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRABDQ9H4I3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRABDQ9H4I3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRABDQ9H4I3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.11■□□□□ 0.97
TRABDQ9H4I3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRABDQ9H4I3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms