Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.35■□□□□ 0.53
NELFAQ9H3P2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.34■□□□□ 0.53
NELFAQ9H3P2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 AC011767.1-201ENST00000617410 1153 ntBASIC18.34■□□□□ 0.53
NELFAQ9H3P2 BID-214ENST00000617586 542 ntTSL 5 BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NELFAQ9H3P2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NELFAQ9H3P2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
NELFAQ9H3P2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NELFAQ9H3P2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NELFAQ9H3P2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NELFAQ9H3P2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NELFAQ9H3P2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 AC245052.3-201ENST00000450182 901 ntBASIC18.3■□□□□ 0.52
NELFAQ9H3P2 DUX4L16-201ENST00000555130 1264 ntBASIC18.3■□□□□ 0.52
NELFAQ9H3P2 AC080038.1-201ENST00000611274 1154 ntBASIC18.3■□□□□ 0.52
NELFAQ9H3P2 AC010536.3-201ENST00000620306 533 ntBASIC18.3■□□□□ 0.52
NELFAQ9H3P2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms