Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPBQ9H078 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPBQ9H078 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPBQ9H078 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.7■□□□□ 0.9
CLPBQ9H078 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPBQ9H078 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
CLPBQ9H078 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLPBQ9H078 SLC29A4P1-201ENST00000398760 971 ntBASIC20.7■□□□□ 0.9
CLPBQ9H078 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.7■□□□□ 0.9
CLPBQ9H078 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.7■□□□□ 0.9
CLPBQ9H078 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLPBQ9H078 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.7■□□□□ 0.9
CLPBQ9H078 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLPBQ9H078 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLPBQ9H078 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.7■□□□□ 0.9
CLPBQ9H078 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLPBQ9H078 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLPBQ9H078 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLPBQ9H078 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLPBQ9H078 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPBQ9H078 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.69■□□□□ 0.9
CLPBQ9H078 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLPBQ9H078 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLPBQ9H078 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPBQ9H078 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLPBQ9H078 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLPBQ9H078 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLPBQ9H078 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPBQ9H078 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CLPBQ9H078 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLPBQ9H078 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLPBQ9H078 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPBQ9H078 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.68■□□□□ 0.9
CLPBQ9H078 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.68■□□□□ 0.9
CLPBQ9H078 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.68■□□□□ 0.9
CLPBQ9H078 CYP2T1P-201ENST00000432607 1285 ntBASIC20.68■□□□□ 0.9
CLPBQ9H078 AC007322.4-201ENST00000509611 723 ntBASIC20.68■□□□□ 0.9
CLPBQ9H078 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.68■□□□□ 0.9
CLPBQ9H078 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.68■□□□□ 0.9
CLPBQ9H078 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPBQ9H078 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.68■□□□□ 0.9
CLPBQ9H078 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.68■□□□□ 0.9
CLPBQ9H078 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.68■□□□□ 0.9
CLPBQ9H078 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPBQ9H078 KRT16P2-201ENST00000414673 1423 ntBASIC20.68■□□□□ 0.9
CLPBQ9H078 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLPBQ9H078 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLPBQ9H078 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLPBQ9H078 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 ABHD17AP1-201ENST00000358206 933 ntBASIC20.67■□□□□ 0.9
CLPBQ9H078 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.67■□□□□ 0.9
CLPBQ9H078 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.67■□□□□ 0.9
CLPBQ9H078 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.67■□□□□ 0.9
CLPBQ9H078 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CLPBQ9H078 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.67■□□□□ 0.9
CLPBQ9H078 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLPBQ9H078 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLPBQ9H078 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLPBQ9H078 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPBQ9H078 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPBQ9H078 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.66■□□□□ 0.9
CLPBQ9H078 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.66■□□□□ 0.9
CLPBQ9H078 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPBQ9H078 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLPBQ9H078 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPBQ9H078 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPBQ9H078 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPBQ9H078 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.66■□□□□ 0.9
CLPBQ9H078 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPBQ9H078 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLPBQ9H078 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.66■□□□□ 0.9
CLPBQ9H078 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPBQ9H078 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPBQ9H078 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CLPBQ9H078 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPBQ9H078 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.66■□□□□ 0.9
CLPBQ9H078 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLPBQ9H078 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPBQ9H078 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.65■□□□□ 0.9
CLPBQ9H078 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPBQ9H078 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.65■□□□□ 0.9
CLPBQ9H078 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.65■□□□□ 0.9
CLPBQ9H078 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLPBQ9H078 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms