Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CNTNAP3Q9BZ76 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNTNAP3Q9BZ76 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 RBM17P1-201ENST00000453646 1190 ntBASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 AC006011.2-201ENST00000621313 1158 ntBASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 LINC01124-201ENST00000409786 2117 ntBASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNTNAP3Q9BZ76 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 MIR1238-201ENST00000408483 83 ntBASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 AP000525.1-201ENST00000608286 694 ntBASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 AC243732.1-201ENST00000612648 864 ntBASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 AC023511.2-201ENST00000618803 211 ntBASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 AC079598.2-202ENST00000546624 1451 ntBASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3Q9BZ76 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 NAPSB-206ENST00000562112 1266 ntBASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 AC100791.3-201ENST00000617619 330 ntBASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3Q9BZ76 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 AC079834.2-201ENST00000609776 1949 ntBASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 AP000347.1-202ENST00000435868 847 ntBASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.69■□□□□ 0.74
CNTNAP3Q9BZ76 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 AL691432.3-201ENST00000621860 400 ntBASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3Q9BZ76 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms