Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 AC123595.1-201ENST00000440769 1046 ntBASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 CCDC92B-201ENST00000575506 885 ntBASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 AC008175.2-201ENST00000612840 297 ntBASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.01■□□□□ 0.63
RSPO3Q9BXY4 KRT16P2-201ENST00000414673 1423 ntBASIC19■□□□□ 0.63
RSPO3Q9BXY4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RSPO3Q9BXY4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 AC004854.2-201ENST00000608450 1441 ntBASIC19■□□□□ 0.63
RSPO3Q9BXY4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RSPO3Q9BXY4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 AP001160.3-201ENST00000601484 763 ntBASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RSPO3Q9BXY4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RSPO3Q9BXY4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 YBX1P1-201ENST00000445822 960 ntBASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RSPO3Q9BXY4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RSPO3Q9BXY4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms