Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 AC006970.2-201ENST00000450065 779 ntBASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 CROCCP5-201ENST00000436658 830 ntBASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 FAM21FP-204ENST00000608637 956 ntBASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2Q9BSQ5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 AC016405.3-201ENST00000607710 860 ntBASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2Q9BSQ5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 MIR663A-201ENST00000385250 93 ntBASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 CYP2T1P-201ENST00000432607 1285 ntBASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 AC069236.1-201ENST00000604339 616 ntBASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 AC008694.1-202ENST00000636953 945 ntBASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CCM2Q9BSQ5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
CCM2Q9BSQ5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.27■□□□□ 0.83
CCM2Q9BSQ5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.83
CCM2Q9BSQ5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 OR10C1-204ENST00000622521 1039 ntBASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.26■□□□□ 0.83
CCM2Q9BSQ5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.25■□□□□ 0.83
CCM2Q9BSQ5 PLK5-205ENST00000642079 1969 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms