Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 EDA-201ENST00000338901 1233 ntBASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 MIR939-201ENST00000401314 82 ntBASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 RASA4CP-201ENST00000424092 1398 ntBASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CPPED1Q9BRF8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CPPED1Q9BRF8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPPED1Q9BRF8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CPPED1Q9BRF8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 AF213884.3-201ENST00000563833 479 ntBASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 AC131212.1-201ENST00000613771 668 ntBASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPPED1Q9BRF8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPPED1Q9BRF8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPPED1Q9BRF8 AC092720.2-201ENST00000602388 1665 ntBASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 AC091305.1-201ENST00000479476 895 ntBASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 AL355001.2-201ENST00000620617 1191 ntBASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 RARRES2P11-201ENST00000635158 484 ntBASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
CPPED1Q9BRF8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 POU5F1P4-201ENST00000413175 1085 ntBASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPPED1Q9BRF8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms