Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC142381.2-201ENST00000566120 298 ntBASIC20.61■□□□□ 0.89
CPNE1Q99829 AC138907.5-202ENST00000569484 235 ntBASIC20.61■□□□□ 0.89
CPNE1Q99829 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE1Q99829 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.61■□□□□ 0.89
CPNE1Q99829 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE1Q99829 KRT16P2-201ENST00000414673 1423 ntBASIC20.61■□□□□ 0.89
CPNE1Q99829 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE1Q99829 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE1Q99829 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 AL162377.1-201ENST00000618844 1793 ntBASIC20.6■□□□□ 0.89
CPNE1Q99829 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE1Q99829 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE1Q99829 RARRES2P11-201ENST00000635158 484 ntBASIC20.6■□□□□ 0.89
CPNE1Q99829 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CPNE1Q99829 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE1Q99829 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE1Q99829 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE1Q99829 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE1Q99829 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE1Q99829 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE1Q99829 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE1Q99829 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE1Q99829 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE1Q99829 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE1Q99829 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE1Q99829 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CPNE1Q99829 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
CPNE1Q99829 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE1Q99829 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CPNE1Q99829 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE1Q99829 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE1Q99829 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE1Q99829 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CPNE1Q99829 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CPNE1Q99829 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE1Q99829 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE1Q99829 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE1Q99829 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE1Q99829 AL512408.1-201ENST00000569378 2000 ntBASIC20.58■□□□□ 0.89
CPNE1Q99829 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE1Q99829 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE1Q99829 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE1Q99829 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.58■□□□□ 0.89
CPNE1Q99829 AC245052.3-201ENST00000450182 901 ntBASIC20.58■□□□□ 0.89
CPNE1Q99829 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE1Q99829 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.58■□□□□ 0.88
CPNE1Q99829 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE1Q99829 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE1Q99829 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE1Q99829 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE1Q99829 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CPNE1Q99829 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.58■□□□□ 0.88
CPNE1Q99829 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CPNE1Q99829 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE1Q99829 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.57■□□□□ 0.88
CPNE1Q99829 AC120498.10-201ENST00000621827 505 ntBASIC20.57■□□□□ 0.88
CPNE1Q99829 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE1Q99829 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CPNE1Q99829 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE1Q99829 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.57■□□□□ 0.88
CPNE1Q99829 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.56■□□□□ 0.88
CPNE1Q99829 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CPNE1Q99829 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CPNE1Q99829 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.56■□□□□ 0.88
CPNE1Q99829 IRS3P-201ENST00000223076 1006 ntBASIC20.56■□□□□ 0.88
CPNE1Q99829 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.56■□□□□ 0.88
CPNE1Q99829 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPNE1Q99829 AC027612.3-201ENST00000413684 1047 ntBASIC20.56■□□□□ 0.88
CPNE1Q99829 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.56■□□□□ 0.88
CPNE1Q99829 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.56■□□□□ 0.88
CPNE1Q99829 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPNE1Q99829 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.56■□□□□ 0.88
CPNE1Q99829 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CPNE1Q99829 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPNE1Q99829 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE1Q99829 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms