Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV9Q99603 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 AL121603.2-201ENST00000557373 2117 ntBASIC16.07■□□□□ 0.16
TRGV9Q99603 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRGV9Q99603 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 MIR939-201ENST00000401314 82 ntBASIC16.07■□□□□ 0.16
TRGV9Q99603 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV9Q99603 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV9Q99603 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV9Q99603 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV9Q99603 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV9Q99603 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV9Q99603 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV9Q99603 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV9Q99603 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRGV9Q99603 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV9Q99603 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRGV9Q99603 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV9Q99603 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV9Q99603 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRGV9Q99603 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TRGV9Q99603 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV9Q99603 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV9Q99603 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV9Q99603 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV9Q99603 AF213884.3-201ENST00000563833 479 ntBASIC16.06■□□□□ 0.16
TRGV9Q99603 TPRG1LP1-201ENST00000598702 760 ntBASIC16.06■□□□□ 0.16
TRGV9Q99603 AL354811.1-201ENST00000610286 706 ntBASIC16.06■□□□□ 0.16
TRGV9Q99603 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV9Q99603 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV9Q99603 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV9Q99603 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRGV9Q99603 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV9Q99603 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRGV9Q99603 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV9Q99603 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV9Q99603 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV9Q99603 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV9Q99603 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV9Q99603 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV9Q99603 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV9Q99603 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV9Q99603 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV9Q99603 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV9Q99603 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV9Q99603 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV9Q99603 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRGV9Q99603 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV9Q99603 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRGV9Q99603 AL512408.1-201ENST00000569378 2000 ntBASIC16.04■□□□□ 0.16
TRGV9Q99603 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.04■□□□□ 0.16
TRGV9Q99603 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRGV9Q99603 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRGV9Q99603 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV9Q99603 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRGV9Q99603 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV9Q99603 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.04■□□□□ 0.16
TRGV9Q99603 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV9Q99603 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV9Q99603 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRGV9Q99603 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms