Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SCAF11Q99590 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC29.86■■■□□ 2.37
SCAF11Q99590 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC29.86■■■□□ 2.37
SCAF11Q99590 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC29.86■■■□□ 2.37
SCAF11Q99590 FAM99A-202ENST00000538190 1989 ntBASIC29.86■■■□□ 2.37
SCAF11Q99590 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SCAF11Q99590 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
SCAF11Q99590 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC29.86■■■□□ 2.37
SCAF11Q99590 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC29.86■■■□□ 2.37
SCAF11Q99590 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC29.86■■■□□ 2.37
SCAF11Q99590 HES2-205ENST00000487437 968 ntTSL 3 BASIC29.86■■■□□ 2.37
SCAF11Q99590 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC29.86■■■□□ 2.37
SCAF11Q99590 GALC-202ENST00000393568 2054 ntTSL 2 BASIC29.86■■■□□ 2.37
SCAF11Q99590 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
SCAF11Q99590 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SCAF11Q99590 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC29.85■■■□□ 2.37
SCAF11Q99590 AC239809.2-201ENST00000415381 517 ntBASIC29.85■■■□□ 2.37
SCAF11Q99590 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC29.85■■■□□ 2.37
SCAF11Q99590 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
SCAF11Q99590 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SCAF11Q99590 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC29.85■■■□□ 2.37
SCAF11Q99590 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC29.85■■■□□ 2.37
SCAF11Q99590 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF11Q99590 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
SCAF11Q99590 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
SCAF11Q99590 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF11Q99590 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF11Q99590 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
SCAF11Q99590 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC29.84■■■□□ 2.37
SCAF11Q99590 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC29.83■■■□□ 2.37
SCAF11Q99590 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
SCAF11Q99590 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC29.83■■■□□ 2.37
SCAF11Q99590 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 CYP21A1P-202ENST00000354927 1481 ntBASIC29.83■■■□□ 2.37
SCAF11Q99590 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC29.83■■■□□ 2.37
SCAF11Q99590 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF11Q99590 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC29.83■■■□□ 2.37
SCAF11Q99590 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
SCAF11Q99590 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.82■■■□□ 2.36
SCAF11Q99590 AL135905.2-201ENST00000584934 1404 ntBASIC29.82■■■□□ 2.36
SCAF11Q99590 AP001412.1-201ENST00000608405 714 ntBASIC29.82■■■□□ 2.36
SCAF11Q99590 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
SCAF11Q99590 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF11Q99590 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF11Q99590 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF11Q99590 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF11Q99590 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC29.81■■■□□ 2.36
SCAF11Q99590 TK2-204ENST00000525974 1178 ntTSL 2 BASIC29.81■■■□□ 2.36
SCAF11Q99590 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
SCAF11Q99590 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC29.81■■■□□ 2.36
SCAF11Q99590 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
SCAF11Q99590 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF11Q99590 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF11Q99590 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF11Q99590 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF11Q99590 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC29.81■■■□□ 2.36
SCAF11Q99590 AC068473.5-201ENST00000616428 2072 ntBASIC29.81■■■□□ 2.36
SCAF11Q99590 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC29.8■■■□□ 2.36
SCAF11Q99590 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
SCAF11Q99590 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 NXN-202ENST00000537628 1340 ntTSL 3 BASIC29.8■■■□□ 2.36
SCAF11Q99590 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC29.8■■■□□ 2.36
SCAF11Q99590 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC29.8■■■□□ 2.36
SCAF11Q99590 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
SCAF11Q99590 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 AC007322.3-201ENST00000426526 701 ntBASIC29.8■■■□□ 2.36
SCAF11Q99590 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC29.8■■■□□ 2.36
SCAF11Q99590 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF11Q99590 RN7SL850P-201ENST00000579959 291 ntBASIC29.8■■■□□ 2.36
SCAF11Q99590 CD177P1-201ENST00000606252 935 ntBASIC29.8■■■□□ 2.36
SCAF11Q99590 AL023875.1-201ENST00000640777 796 ntBASIC29.8■■■□□ 2.36
SCAF11Q99590 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC29.79■■■□□ 2.36
SCAF11Q99590 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
SCAF11Q99590 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC29.79■■■□□ 2.36
SCAF11Q99590 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC29.79■■■□□ 2.36
SCAF11Q99590 KRT18P35-201ENST00000510488 1269 ntBASIC29.79■■■□□ 2.36
SCAF11Q99590 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC29.79■■■□□ 2.36
SCAF11Q99590 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF11Q99590 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
SCAF11Q99590 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms