Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF2Q99496 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 AIRN-201ENST00000601203 4374 ntBASIC16.34■□□□□ 0.21
RNF2Q99496 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RNF2Q99496 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RNF2Q99496 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RNF2Q99496 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF2Q99496 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF2Q99496 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF2Q99496 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF2Q99496 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RNF2Q99496 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF2Q99496 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RNF2Q99496 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF2Q99496 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF2Q99496 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF2Q99496 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF2Q99496 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF2Q99496 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF2Q99496 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF2Q99496 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RNF2Q99496 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF2Q99496 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF2Q99496 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF2Q99496 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RNF2Q99496 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF2Q99496 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF2Q99496 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RNF2Q99496 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF2Q99496 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF2Q99496 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF2Q99496 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF2Q99496 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF2Q99496 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF2Q99496 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF2Q99496 SMUG1P1-201ENST00000590640 811 ntBASIC16.32■□□□□ 0.2
RNF2Q99496 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 AC105233.4-201ENST00000642045 216 ntBASIC16.32■□□□□ 0.2
RNF2Q99496 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF2Q99496 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF2Q99496 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF2Q99496 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF2Q99496 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 MIR572-201ENST00000384983 95 ntBASIC16.31■□□□□ 0.2
RNF2Q99496 AC105265.2-201ENST00000467189 838 ntBASIC16.31■□□□□ 0.2
RNF2Q99496 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF2Q99496 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF2Q99496 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF2Q99496 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF2Q99496 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF2Q99496 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF2Q99496 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms