Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDL1Q96EA4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDL1Q96EA4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.23■□□□□ 0.83
SPDL1Q96EA4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 AC092171.4-201ENST00000609130 632 ntBASIC20.22■□□□□ 0.83
SPDL1Q96EA4 SMG8-203ENST00000578922 2178 ntBASIC20.22■□□□□ 0.83
SPDL1Q96EA4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDL1Q96EA4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 SRD5A1P1-201ENST00000442297 786 ntBASIC20.21■□□□□ 0.83
SPDL1Q96EA4 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.21■□□□□ 0.83
SPDL1Q96EA4 MIR3621-201ENST00000580529 85 ntBASIC20.21■□□□□ 0.83
SPDL1Q96EA4 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.21■□□□□ 0.83
SPDL1Q96EA4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SPDL1Q96EA4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SPDL1Q96EA4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.2■□□□□ 0.83
SPDL1Q96EA4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SPDL1Q96EA4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDL1Q96EA4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDL1Q96EA4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDL1Q96EA4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPDL1Q96EA4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms