Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRRC39Q96DD0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.83■□□□□ 0.92
LRRC39Q96DD0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.83■□□□□ 0.92
LRRC39Q96DD0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 AL512408.1-201ENST00000569378 2000 ntBASIC20.82■□□□□ 0.92
LRRC39Q96DD0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 AL139246.5-201ENST00000606645 996 ntBASIC20.82■□□□□ 0.92
LRRC39Q96DD0 AC120498.10-201ENST00000621827 505 ntBASIC20.82■□□□□ 0.92
LRRC39Q96DD0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRC39Q96DD0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRC39Q96DD0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRC39Q96DD0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 AC010141.2-201ENST00000452426 721 ntBASIC20.79■□□□□ 0.92
LRRC39Q96DD0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 AC092720.2-201ENST00000602388 1665 ntBASIC20.79■□□□□ 0.92
LRRC39Q96DD0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRC39Q96DD0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 AC027612.3-201ENST00000413684 1047 ntBASIC20.78■□□□□ 0.92
LRRC39Q96DD0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.78■□□□□ 0.92
LRRC39Q96DD0 AC142381.2-201ENST00000566120 298 ntBASIC20.78■□□□□ 0.92
LRRC39Q96DD0 MIR6084-201ENST00000622012 110 ntBASIC20.78■□□□□ 0.92
LRRC39Q96DD0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms