Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 AC006015.1-201ENST00000429970 570 ntBASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 CDV3P1-201ENST00000471403 739 ntBASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 TERF1P5-201ENST00000477545 1207 ntBASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOBEC3DQ96AK3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOBEC3DQ96AK3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.83■□□□□ 0.45
APOBEC3DQ96AK3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOBEC3DQ96AK3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOBEC3DQ96AK3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APOBEC3DQ96AK3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.83■□□□□ 0.45
APOBEC3DQ96AK3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APOBEC3DQ96AK3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 AC007322.3-201ENST00000426526 701 ntBASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 AC013268.1-206ENST00000638368 961 ntBASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 AC112229.1-201ENST00000639295 961 ntBASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APOBEC3DQ96AK3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 MFSD11-216ENST00000590393 1141 ntBASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 AC022517.1-201ENST00000592429 346 ntBASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APOBEC3DQ96AK3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOBEC3DQ96AK3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOBEC3DQ96AK3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
APOBEC3DQ96AK3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
APOBEC3DQ96AK3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
APOBEC3DQ96AK3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms