Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBE2E3Q969T4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBE2E3Q969T4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 AC016769.1-201ENST00000409132 1010 ntBASIC19.79■□□□□ 0.76
UBE2E3Q969T4 AC091799.1-201ENST00000422823 811 ntBASIC19.79■□□□□ 0.76
UBE2E3Q969T4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 CDV3P1-201ENST00000471403 739 ntBASIC19.79■□□□□ 0.76
UBE2E3Q969T4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBE2E3Q969T4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 AC007322.3-201ENST00000426526 701 ntBASIC19.78■□□□□ 0.76
UBE2E3Q969T4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBE2E3Q969T4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 AC007225.1-201ENST00000566331 1836 ntBASIC19.77■□□□□ 0.76
UBE2E3Q969T4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.77■□□□□ 0.76
UBE2E3Q969T4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 TERF1P5-201ENST00000477545 1207 ntBASIC19.77■□□□□ 0.76
UBE2E3Q969T4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.77■□□□□ 0.76
UBE2E3Q969T4 AC010536.3-201ENST00000620306 533 ntBASIC19.77■□□□□ 0.76
UBE2E3Q969T4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
UBE2E3Q969T4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UBE2E3Q969T4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UBE2E3Q969T4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBE2E3Q969T4 AC027702.1-201ENST00000563810 1770 ntBASIC19.76■□□□□ 0.75
UBE2E3Q969T4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms