Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATL1Q8WXF7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 AC116050.2-201ENST00000612102 1779 ntBASIC20.08■□□□□ 0.81
ATL1Q8WXF7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ATL1Q8WXF7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
ATL1Q8WXF7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ATL1Q8WXF7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.08■□□□□ 0.8
ATL1Q8WXF7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATL1Q8WXF7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.08■□□□□ 0.8
ATL1Q8WXF7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATL1Q8WXF7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 AC016769.1-201ENST00000409132 1010 ntBASIC20.07■□□□□ 0.8
ATL1Q8WXF7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.07■□□□□ 0.8
ATL1Q8WXF7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
ATL1Q8WXF7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 MIR935-201ENST00000401179 91 ntBASIC20.06■□□□□ 0.8
ATL1Q8WXF7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.06■□□□□ 0.8
ATL1Q8WXF7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 AL162430.1-201ENST00000480705 870 ntBASIC20.05■□□□□ 0.8
ATL1Q8WXF7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATL1Q8WXF7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms