Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SHKBP1Q8TBC3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.7■■□□□ 1.07
SHKBP1Q8TBC3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 RPS2P52-201ENST00000469610 820 ntBASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 SLC25A24-204ENST00000569674 2357 ntBASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHKBP1Q8TBC3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 UNC93B5-201ENST00000530315 699 ntBASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 AC006058.3-201ENST00000606217 1069 ntBASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHKBP1Q8TBC3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHKBP1Q8TBC3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 MCRIP2P1-201ENST00000394346 511 ntBASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.67■■□□□ 1.06
SHKBP1Q8TBC3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 AC128676.1-201ENST00000454392 318 ntBASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHKBP1Q8TBC3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 AC007322.3-201ENST00000426526 701 ntBASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 GCSHP5-201ENST00000443090 522 ntBASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 AC026366.1-201ENST00000488803 879 ntBASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SHKBP1Q8TBC3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.64■■□□□ 1.06
SHKBP1Q8TBC3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SHKBP1Q8TBC3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SHKBP1Q8TBC3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms