Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DNAAF1Q8NEP3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 EDA-201ENST00000338901 1233 ntBASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 AC008764.7-201ENST00000593779 1081 ntBASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 AC106739.1-201ENST00000617035 715 ntBASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DNAAF1Q8NEP3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DNAAF1Q8NEP3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DNAAF1Q8NEP3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 AC099791.1-201ENST00000416440 715 ntBASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 AC096631.2-201ENST00000436136 790 ntBASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 PBX2P1-201ENST00000493219 1291 ntBASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.08■□□□□ 0.48
DNAAF1Q8NEP3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 AC007225.1-201ENST00000566331 1836 ntBASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
DNAAF1Q8NEP3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 AC105233.4-201ENST00000642045 216 ntBASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 AC020907.5-201ENST00000624372 1936 ntBASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.06■□□□□ 0.48
DNAAF1Q8NEP3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 AC055733.4-201ENST00000638462 1354 ntBASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 TSPY26P-201ENST00000476365 1326 ntBASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms