Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 AC092368.3-202ENST00000574180 1591 ntBASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 CDV3P1-201ENST00000471403 739 ntBASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF248Q8NDW4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF248Q8NDW4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF248Q8NDW4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 KRT18P21-201ENST00000515767 1272 ntBASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 AC061975.6-201ENST00000579045 1553 ntBASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 AC087742.1-201ENST00000575880 1738 ntBASIC19.68■□□□□ 0.74
ZNF248Q8NDW4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 BX088651.1-201ENST00000540551 451 ntBASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 AC069544.1-201ENST00000609399 999 ntBASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 KRT17P2-201ENST00000300992 1314 ntBASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF248Q8NDW4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms