Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.52■■□□□ 1.04
SCML4Q8N228 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.52■■□□□ 1.04
SCML4Q8N228 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SCML4Q8N228 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SCML4Q8N228 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 AC073210.2-201ENST00000430369 194 ntBASIC21.52■■□□□ 1.04
SCML4Q8N228 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.52■■□□□ 1.04
SCML4Q8N228 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.52■■□□□ 1.04
SCML4Q8N228 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.52■■□□□ 1.04
SCML4Q8N228 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.52■■□□□ 1.04
SCML4Q8N228 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.52■■□□□ 1.04
SCML4Q8N228 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 AF106564.1-201ENST00000607058 2553 ntBASIC21.52■■□□□ 1.04
SCML4Q8N228 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 AC087633.2-202ENST00000565166 1439 ntBASIC21.52■■□□□ 1.04
SCML4Q8N228 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.52■■□□□ 1.04
SCML4Q8N228 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCML4Q8N228 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
SCML4Q8N228 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SCML4Q8N228 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.52■■□□□ 1.03
SCML4Q8N228 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.51■■□□□ 1.03
SCML4Q8N228 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.51■■□□□ 1.03
SCML4Q8N228 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
SCML4Q8N228 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.51■■□□□ 1.03
SCML4Q8N228 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML4Q8N228 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML4Q8N228 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCML4Q8N228 MIPEPP3-201ENST00000412105 444 ntBASIC21.51■■□□□ 1.03
SCML4Q8N228 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.51■■□□□ 1.03
SCML4Q8N228 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
SCML4Q8N228 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCML4Q8N228 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML4Q8N228 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCML4Q8N228 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
SCML4Q8N228 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML4Q8N228 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML4Q8N228 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCML4Q8N228 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML4Q8N228 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.5■■□□□ 1.03
SCML4Q8N228 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.5■■□□□ 1.03
SCML4Q8N228 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.5■■□□□ 1.03
SCML4Q8N228 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.5■■□□□ 1.03
SCML4Q8N228 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
SCML4Q8N228 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCML4Q8N228 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCML4Q8N228 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.5■■□□□ 1.03
SCML4Q8N228 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
SCML4Q8N228 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SCML4Q8N228 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SCML4Q8N228 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCML4Q8N228 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCML4Q8N228 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.49■■□□□ 1.03
SCML4Q8N228 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCML4Q8N228 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCML4Q8N228 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCML4Q8N228 PGM5P4-201ENST00000421970 445 ntBASIC21.49■■□□□ 1.03
SCML4Q8N228 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.49■■□□□ 1.03
SCML4Q8N228 AC092118.2-201ENST00000613495 667 ntBASIC21.49■■□□□ 1.03
SCML4Q8N228 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.49■■□□□ 1.03
SCML4Q8N228 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCML4Q8N228 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCML4Q8N228 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SCML4Q8N228 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.49■■□□□ 1.03
SCML4Q8N228 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.49■■□□□ 1.03
SCML4Q8N228 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.48■■□□□ 1.03
SCML4Q8N228 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCML4Q8N228 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.48■■□□□ 1.03
SCML4Q8N228 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCML4Q8N228 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCML4Q8N228 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCML4Q8N228 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.48■■□□□ 1.03
SCML4Q8N228 KRT18P68-201ENST00000392293 1000 ntBASIC21.48■■□□□ 1.03
SCML4Q8N228 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SCML4Q8N228 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.48■■□□□ 1.03
SCML4Q8N228 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCML4Q8N228 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCML4Q8N228 PLK5-205ENST00000642079 1969 ntBASIC21.48■■□□□ 1.03
SCML4Q8N228 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
SCML4Q8N228 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCML4Q8N228 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCML4Q8N228 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCML4Q8N228 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCML4Q8N228 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.47■■□□□ 1.03
SCML4Q8N228 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCML4Q8N228 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.47■■□□□ 1.03
SCML4Q8N228 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.47■■□□□ 1.03
SCML4Q8N228 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.47■■□□□ 1.03
SCML4Q8N228 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.47■■□□□ 1.03
SCML4Q8N228 MIR4758-201ENST00000577688 71 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms