Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.64■□□□□ 0.73
COL27A1Q8IZC6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL27A1Q8IZC6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.62■□□□□ 0.73
COL27A1Q8IZC6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 AL049637.2-201ENST00000641778 930 ntBASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL27A1Q8IZC6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.6■□□□□ 0.73
COL27A1Q8IZC6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 AC239809.2-201ENST00000415381 517 ntBASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
COL27A1Q8IZC6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms