Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CBWD2Q8IUF1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CBWD2Q8IUF1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CBWD2Q8IUF1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CBWD2Q8IUF1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.44■■□□□ 1.18
CBWD2Q8IUF1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 AC006128.1-201ENST00000624704 1661 ntBASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 CYP2T1P-201ENST00000432607 1285 ntBASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 AC026185.1-201ENST00000445748 174 ntBASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 AC005181.1-201ENST00000604782 1256 ntBASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.43■■□□□ 1.18
CBWD2Q8IUF1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 CROCCP5-201ENST00000436658 830 ntBASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 CDV3P1-201ENST00000471403 739 ntBASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 AL050303.2-201ENST00000619798 666 ntBASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CBWD2Q8IUF1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 AL162412.1-201ENST00000567129 965 ntBASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CBWD2Q8IUF1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 MIR663A-201ENST00000385250 93 ntBASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CBWD2Q8IUF1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CBWD2Q8IUF1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CBWD2Q8IUF1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.39■■□□□ 1.18
CBWD2Q8IUF1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CBWD2Q8IUF1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
CBWD2Q8IUF1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CBWD2Q8IUF1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 FAM21FP-204ENST00000608637 956 ntBASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.39■■□□□ 1.17
CBWD2Q8IUF1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD2Q8IUF1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms