Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 AC008550.1-201ENST00000511500 884 ntBASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 AC087633.2-202ENST00000565166 1439 ntBASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
RAI1Q7Z5J4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 AC233263.1-201ENST00000578059 224 ntBASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 HLA-B-256ENST00000639848 1089 ntBASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.68■□□□□ 0.42
RAI1Q7Z5J4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 AC092368.3-202ENST00000574180 1591 ntBASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 AC079834.2-201ENST00000609776 1949 ntBASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.67■□□□□ 0.42
RAI1Q7Z5J4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 UBE2SP1-201ENST00000450587 669 ntBASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms