Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 AL356652.1-201ENST00000615962 565 ntBASIC21.42■■□□□ 1.02
DENND4AQ7Z401 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 AC116050.2-201ENST00000612102 1779 ntBASIC21.42■■□□□ 1.02
DENND4AQ7Z401 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DENND4AQ7Z401 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 KRASP1-201ENST00000407852 552 ntBASIC21.41■■□□□ 1.02
DENND4AQ7Z401 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 MIR4785-201ENST00000585005 73 ntBASIC21.41■■□□□ 1.02
DENND4AQ7Z401 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 REXO1L12P-201ENST00000622156 912 ntBASIC21.41■■□□□ 1.02
DENND4AQ7Z401 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DENND4AQ7Z401 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.4■■□□□ 1.02
DENND4AQ7Z401 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DENND4AQ7Z401 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.39■■□□□ 1.02
DENND4AQ7Z401 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.39■■□□□ 1.02
DENND4AQ7Z401 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.39■■□□□ 1.02
DENND4AQ7Z401 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.39■■□□□ 1.02
DENND4AQ7Z401 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DENND4AQ7Z401 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DENND4AQ7Z401 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DENND4AQ7Z401 C9orf163-202ENST00000624034 2573 ntBASIC21.39■■□□□ 1.01
DENND4AQ7Z401 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
DENND4AQ7Z401 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.39■■□□□ 1.01
DENND4AQ7Z401 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.39■■□□□ 1.01
DENND4AQ7Z401 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DENND4AQ7Z401 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
DENND4AQ7Z401 AL023875.1-201ENST00000640777 796 ntBASIC21.39■■□□□ 1.01
DENND4AQ7Z401 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 RARRES2P10-201ENST00000564312 460 ntBASIC21.38■■□□□ 1.01
DENND4AQ7Z401 RN7SL850P-201ENST00000579959 291 ntBASIC21.38■■□□□ 1.01
DENND4AQ7Z401 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DENND4AQ7Z401 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DENND4AQ7Z401 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DENND4AQ7Z401 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms