Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS13CQ709C8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
VPS13CQ709C8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VPS13CQ709C8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VPS13CQ709C8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.32■□□□□ 0.36
VPS13CQ709C8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 FAM21FP-204ENST00000608637 956 ntBASIC17.32■□□□□ 0.36
VPS13CQ709C8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.32■□□□□ 0.36
VPS13CQ709C8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13CQ709C8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 KRT17P2-201ENST00000300992 1314 ntBASIC17.31■□□□□ 0.36
VPS13CQ709C8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 AP003071.4-201ENST00000562276 1284 ntBASIC17.31■□□□□ 0.36
VPS13CQ709C8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13CQ709C8 ARMC10P1-201ENST00000313754 855 ntBASIC17.31■□□□□ 0.36
VPS13CQ709C8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.31■□□□□ 0.36
VPS13CQ709C8 AC080038.3-201ENST00000623346 1952 ntBASIC17.31■□□□□ 0.36
VPS13CQ709C8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS13CQ709C8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 AC124283.5-201ENST00000624661 1809 ntBASIC17.3■□□□□ 0.36
VPS13CQ709C8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.3■□□□□ 0.36
VPS13CQ709C8 AC105020.6-201ENST00000621523 1217 ntBASIC17.3■□□□□ 0.36
VPS13CQ709C8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS13CQ709C8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VPS13CQ709C8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VPS13CQ709C8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13CQ709C8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS13CQ709C8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS13CQ709C8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS13CQ709C8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS13CQ709C8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS13CQ709C8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
VPS13CQ709C8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VPS13CQ709C8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13CQ709C8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms