Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC141Q6ZP82 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC141Q6ZP82 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC141Q6ZP82 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC141Q6ZP82 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.06■■■□□ 2.56
CCDC141Q6ZP82 AC124016.1-201ENST00000609552 612 ntBASIC31.06■■■□□ 2.56
CCDC141Q6ZP82 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC141Q6ZP82 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 AC133681.1-201ENST00000465482 601 ntBASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.05■■■□□ 2.56
CCDC141Q6ZP82 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC141Q6ZP82 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC141Q6ZP82 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CCDC141Q6ZP82 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC31.04■■■□□ 2.56
CCDC141Q6ZP82 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.04■■■□□ 2.56
CCDC141Q6ZP82 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.04■■■□□ 2.56
CCDC141Q6ZP82 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.04■■■□□ 2.56
CCDC141Q6ZP82 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 CASK-201ENST00000378154 2494 ntTSL 5 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 AC233702.5-201ENST00000584107 538 ntBASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 AL356652.1-201ENST00000615962 565 ntBASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 AC242852.2-201ENST00000615738 1807 ntBASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CCDC141Q6ZP82 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 AC005829.2-201ENST00000571422 1056 ntBASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC141Q6ZP82 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 PGM5P4-201ENST00000421970 445 ntBASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC141Q6ZP82 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC31.01■■■□□ 2.55
CCDC141Q6ZP82 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
CCDC141Q6ZP82 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.01■■■□□ 2.55
CCDC141Q6ZP82 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CCDC141Q6ZP82 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
CCDC141Q6ZP82 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC141Q6ZP82 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC141Q6ZP82 MOK-233ENST00000524214 1539 ntTSL 2 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31■■■□□ 2.55
CCDC141Q6ZP82 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC141Q6ZP82 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC141Q6ZP82 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 AC239809.2-201ENST00000415381 517 ntBASIC31■■■□□ 2.55
CCDC141Q6ZP82 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31■■■□□ 2.55
CCDC141Q6ZP82 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31■■■□□ 2.55
CCDC141Q6ZP82 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC141Q6ZP82 GXYLT1P3-201ENST00000453058 1193 ntBASIC30.99■■■□□ 2.55
CCDC141Q6ZP82 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC141Q6ZP82 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC141Q6ZP82 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC141Q6ZP82 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC141Q6ZP82 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CCDC141Q6ZP82 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC141Q6ZP82 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC141Q6ZP82 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC141Q6ZP82 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC141Q6ZP82 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
CCDC141Q6ZP82 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC141Q6ZP82 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC141Q6ZP82 GOLGA2P6-201ENST00000340929 2049 ntBASIC30.97■■■□□ 2.55
CCDC141Q6ZP82 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC30.97■■■□□ 2.55
CCDC141Q6ZP82 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC141Q6ZP82 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC141Q6ZP82 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC30.97■■■□□ 2.55
CCDC141Q6ZP82 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms